BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024A09LP1|AL428149
(989 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1009 1157 0.0
3x_Contig1331 586 e-167
>3x_Contig1009
Length = 4650
Score = 1157 bits (583), Expect = 0.0
Identities = 608/613 (99%), Gaps = 3/613 (0%)
Strand = Plus / Plus
Query: 379 ttgggccctgaccaacttcaggatccaagttatcgtcattatcgttctccccagtagaac 438
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 18 ttgggccctgaccaacttcag-atccaagttatcgtcattatcgttctccccagtagaac 76
Query: 439 cgatagtttcctctttgtaatggatcaagaaatctttgatattatcttgagctacctcgt 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 cgatagtttcctctttgtaatggatcaagaaatctttgatattatcttgagctacctcgt 136
Query: 499 agtcaattccgagatccagtgtgggcaaaaccgatgaagccatggtactggtggtgttct 558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 agtcaattccgagatccagtgtgggcaaaaccgatgaagccatggtactggtggtgttct 196
Query: 559 gaatcgttggttggtgtgagtggcagcagacagtaggaaaactgataacggagaagttgt 618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 197 gaatcgttggttggtgtgagtggcagcagacagtaggaaaactgataacggagaagttgt 256
Query: 619 tgaagattagcagaaagtgtatgcgtaaatgtttcaaagatcaattggaaaaacgaaagt 678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 tgaagattagcagaaagtgtatgcgtaaatgtttcaaagatcaattggaaaaacgaaagt 316
Query: 679 gatttttattttacagttcctaatcgggtagaagatgaaagacgcattacccggacacaa 738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gatttttattttacagttcctaatcgggtagaagatgaaagacgcattacccggacacaa 376
Query: 739 ccacgtgacaaaacataccaacataattaccctccctcttatagtctatttttaatttga 798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 ccacgtgacaaaacataccaacataattaccctccctcttatagtctatttttaatttga 436
Query: 799 aattgcaattcaatttttcaattttcagtacttttcataaacgaccacattggcttggct 858
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 aattgcaattcaatttttcaattttcagtacttttcataaacgaccacattggcttggct 496
Query: 859 gga-ccccggtatagagaggcagttacctcaaaaattgggtg-aaacaaccttaacattg 916
||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 497 ggacccccggtatagagaggcagtaacctcaaaaattgggtgaaaacaaccttaacattg 556
Query: 917 cattatctaagcctaacaagtgttcaatgggccaatcgagtggacaatggatatagtata 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cattatctaagcctaacaagtgttcaatgggccaatcgagtggacaatggatatagtata 616
Query: 977 ggaatttkgcatt 989
||||||| |||||
Sbjct: 617 ggaatttggcatt 629
>3x_Contig1331
Length = 5830
Score = 586 bits (295), Expect = e-167
Identities = 302/303 (99%), Gaps = 1/303 (0%)
Strand = Plus / Minus
Query: 1 gatccaaattggtttgagactcttcgcccatcccttgagccatttgttggaattcatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gatccaaattggtttgagactcttcgcccatcccttgagccatttgttggaattcatctc 246
Query: 61 tagtttccaagatatttctttcgtttctcaatcttcgttggtgtaaaatgacgtccaata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tagtttccaagatatttctttcgtttctcaatcttcgttggtgtaaaatgacgtccaata 186
Query: 121 catctgtttcgtaatcgatatctttcgttggaggcggcaatagttcatctacacagttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 catctgtttcgtaatcgatatctttcgttggaggcggcaatagttcatctacacagttgg 126
Query: 181 agaaaagttctgtgaaccgcttagtgttttccatgatgatacggtgtaagttaactaagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 agaaaagttctgtgaaccgcttagtgttttccatgatgatacggtgtaagttaactaagt 66
Query: 241 tcttgccttgtgctgctgtatttgacgaagacaaattttcaaattgcttggtgcgctgat 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 65 tcttgccttgtgctgctgtatttgacgaagacaaa-tttcaaattgcttggtgcgctgat 7
Query: 301 aat 303
|||
Sbjct: 6 aat 4
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8402
Number of Sequences: 1807
Number of extensions: 8402
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 2
length of query: 989
length of database: 10,358,551
effective HSP length: 16
effective length of query: 973
effective length of database: 10,329,639
effective search space: 10050738747
effective search space used: 10050738747
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)